STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP93005.1Hypothetical protein. (405 aa)    
Predicted Functional Partners:
SEP84730.1
Protein of unknown function.
  
     0.774
SEP89298.1
Dienelactone hydrolase.
  
     0.774
SEQ12055.1
Hypothetical protein.
  
     0.774
SEQ20212.1
Hypothetical protein.
  
     0.774
SES12673.1
Protein of unknown function.
  
     0.774
SEP76240.1
Hypothetical protein.
  
     0.773
SEQ24875.1
Hypothetical protein.
  
     0.773
SER52983.1
PH domain-containing protein.
  
     0.773
SEQ71760.1
LytR cell envelope-related transcriptional attenuator.
  
     0.772
SEQ16076.1
Hypothetical protein.
  
     0.771
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.