STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP93496.1Cell wall-active antibiotics response 4TMS YvqF. (214 aa)    
Predicted Functional Partners:
SEP70443.1
Protein of unknown function.
  
     0.758
SEP93522.1
Hypothetical protein.
       0.732
SEQ53635.1
Phage shock protein A (PspA) family protein.
  
  
 0.629
SER40126.1
Hypothetical protein.
  
     0.574
SEQ69690.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.547
SEQ33073.1
Membrane carboxypeptidase (penicillin-binding protein).
 
    0.525
SEP93444.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.521
SEP93394.1
Aldehyde dehydrogenase family protein.
       0.518
SEP74748.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
  
 0.512
SEQ35015.1
Putative adhesin.
  
  
 0.512
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.