STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ25323.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (226 aa)    
Predicted Functional Partners:
SER60109.1
Signal transduction histidine kinase.
  
0.989
SEQ25353.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.986
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 0.979
SES00156.1
Hypothetical protein.
  
 0.970
SES07526.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.951
SEQ92032.1
PAS/PAC sensor hybrid histidine kinase.
 
0.927
SER84494.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
  0.925
SES07091.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
  0.917
SER27759.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
  0.900
SEQ91105.1
Anti-anti-sigma factor.
  
 0.896
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.