STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ29278.1Carbonic anhydrase. (170 aa)    
Predicted Functional Partners:
SEQ50230.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.920
SER17148.1
Carbonic anhydrase.
    
 0.917
SEQ49837.1
Carbonic anhydrase.
  
 
 0.909
SER18471.1
Carbonic anhydrase.
     
 0.893
SER25204.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.810
SER54032.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.802
SEQ50203.1
Sulfate permease, MFS superfamily.
  
 
 0.790
SES37345.1
Sulfate permease, SulP family.
  
 
 0.790
SEQ29308.1
A/G-specific DNA-adenine glycosylase.
     
 0.642
SEQ29241.1
Hypothetical protein.
       0.590
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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