STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ33318.1Predicted phosphohydrolase, MPP superfamily. (317 aa)    
Predicted Functional Partners:
SEQ64105.1
Protein of unknown function.
  
     0.689
SEQ33283.1
Hypothetical protein.
       0.676
SER31266.1
Protein of unknown function.
  
     0.664
SEQ19962.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.655
SEQ71791.1
Protein of unknown function.
  
     0.620
SER97580.1
DNA polymerase III, delta subunit.
  
     0.593
SER42077.1
MerR HTH family regulatory protein.
  
     0.571
rbpA
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.570
SER78821.1
Protein of unknown function.
  
     0.556
SEP83980.1
Cytochrome c biogenesis protein.
  
     0.549
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.