STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ43262.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
SES18717.1
Regulatory protein, luxR family.
  
    0.622
SER23824.1
Tetratricopeptide repeat-containing protein.
  
     0.554
SEQ28431.1
Trehalose 6-phosphatase.
   
    0.544
SER44453.1
Hypothetical protein.
  
    0.535
SEP77983.1
Pectate lyase superfamily protein.
  
    0.521
SEQ68854.1
Hypothetical protein.
  
     0.513
SEQ43229.1
3-methyladenine DNA glycosylase AlkD.
       0.498
SEP66645.1
Glycosyl transferases group 1.
  
     0.489
SER08283.1
AAA domain (dynein-related subfamily).
  
     0.489
SEP75998.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.480
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.