Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ54649.1 | SEQ54682.1 | SAMN05216188_103403 | SAMN05216188_103404 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.759 |
SEQ54649.1 | SEQ54713.1 | SAMN05216188_103403 | SAMN05216188_103405 | Hypothetical protein. | Hypothetical protein. | 0.546 |
SEQ54682.1 | SEQ54649.1 | SAMN05216188_103404 | SAMN05216188_103403 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.759 |
SEQ54682.1 | SEQ54713.1 | SAMN05216188_103404 | SAMN05216188_103405 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.632 |
SEQ54713.1 | SEQ54649.1 | SAMN05216188_103405 | SAMN05216188_103403 | Hypothetical protein. | Hypothetical protein. | 0.546 |
SEQ54713.1 | SEQ54682.1 | SAMN05216188_103405 | SAMN05216188_103404 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.632 |
SEQ54713.1 | SES35649.1 | SAMN05216188_103405 | SAMN05216188_13823 | Hypothetical protein. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.456 |
SEQ54713.1 | thyA | SAMN05216188_103405 | SAMN05216188_13822 | Hypothetical protein. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.402 |
SES35649.1 | SEQ54713.1 | SAMN05216188_13823 | SAMN05216188_103405 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Hypothetical protein. | 0.456 |
SES35649.1 | thyA | SAMN05216188_13823 | SAMN05216188_13822 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.999 |
thyA | SEQ54713.1 | SAMN05216188_13822 | SAMN05216188_103405 | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | Hypothetical protein. | 0.402 |
thyA | SES35649.1 | SAMN05216188_13822 | SAMN05216188_13823 | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.999 |