STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ79386.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
SER18563.1
LysR substrate binding domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.768
SER35655.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.751
SEQ79414.1
Conserved hypothetical integral membrane protein.
 
     0.631
SEP67340.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.612
SEQ79375.1
Hypothetical protein.
       0.601
SEQ79440.1
Predicted metal-dependent enzyme of the double-stranded beta helix superfamily.
 
     0.582
SER59906.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.508
SEQ79348.1
Proprotein convertase P-domain-containing protein; Belongs to the peptidase S8 family.
  
    0.474
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.