STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ76192.1Protein of unknown function. (162 aa)    
Predicted Functional Partners:
SEQ47140.1
Protein of unknown function.
  
     0.743
SEQ95406.1
Protein of unknown function.
  
     0.698
SEQ76160.1
Predicted chitinase.
       0.605
SEQ45846.1
Hypothetical protein.
  
     0.512
SER35732.1
Gentisate 1,2-dioxygenase.
    
  0.448
SEQ08669.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
     0.440
SEQ33854.1
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.438
SER05270.1
Transcriptional regulator, TetR family.
  
     0.436
SEQ64049.1
Hypothetical protein.
  
     0.424
SES31180.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.