STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ80605.1Lysyl oxidase. (318 aa)    
Predicted Functional Partners:
SEQ80574.1
Protoporphyrinogen oxidase.
 
     0.927
SEQ80547.1
Dolichol-phosphate mannosyltransferase.
 
     0.852
SER55044.1
Ribosomal protein S18 acetylase RimI.
  
     0.756
SEQ80327.1
O-antigen ligase.
  
     0.720
SEQ80430.1
Polysaccharide transporter, PST family.
  
     0.711
SES35549.1
Hypothetical protein.
  
     0.682
SES31685.1
Alpha/beta hydrolase family protein.
  
     0.677
SEP71121.1
Hypothetical protein.
  
     0.666
SEQ80277.1
Hypothetical protein.
  
     0.660
SEQ80301.1
Polysaccharide deacetylase.
  
     0.660
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.