Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP88527.1 | SEQ81270.1 | SAMN05216188_101802 | SAMN05216188_105197 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.692 |
SEP88527.1 | SEQ82582.1 | SAMN05216188_101802 | SAMN05216188_105238 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | Proprotein convertase P-domain-containing protein. | 0.522 |
SEP88527.1 | SER68271.1 | SAMN05216188_101802 | SAMN05216188_1147 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.548 |
SEQ81211.1 | SEQ81241.1 | SAMN05216188_105195 | SAMN05216188_105196 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.968 |
SEQ81211.1 | SEQ81270.1 | SAMN05216188_105195 | SAMN05216188_105197 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.707 |
SEQ81211.1 | SEQ81303.1 | SAMN05216188_105195 | SAMN05216188_105198 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | MoxR-like ATPase. | 0.613 |
SEQ81211.1 | SEQ81330.1 | SAMN05216188_105195 | SAMN05216188_105199 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.613 |
SEQ81211.1 | SEQ81348.1 | SAMN05216188_105195 | SAMN05216188_105200 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Protein of unknown function. | 0.668 |
SEQ81241.1 | SEQ81211.1 | SAMN05216188_105196 | SAMN05216188_105195 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.968 |
SEQ81241.1 | SEQ81270.1 | SAMN05216188_105196 | SAMN05216188_105197 | Signal transduction histidine kinase. | Hypothetical protein. | 0.905 |
SEQ81241.1 | SEQ81303.1 | SAMN05216188_105196 | SAMN05216188_105198 | Signal transduction histidine kinase. | MoxR-like ATPase. | 0.613 |
SEQ81241.1 | SEQ81330.1 | SAMN05216188_105196 | SAMN05216188_105199 | Signal transduction histidine kinase. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.759 |
SEQ81241.1 | SEQ81348.1 | SAMN05216188_105196 | SAMN05216188_105200 | Signal transduction histidine kinase. | Protein of unknown function. | 0.848 |
SEQ81270.1 | SEP88527.1 | SAMN05216188_105197 | SAMN05216188_101802 | Hypothetical protein. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.692 |
SEQ81270.1 | SEQ81211.1 | SAMN05216188_105197 | SAMN05216188_105195 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.707 |
SEQ81270.1 | SEQ81241.1 | SAMN05216188_105197 | SAMN05216188_105196 | Hypothetical protein. | Signal transduction histidine kinase. | 0.905 |
SEQ81270.1 | SEQ81303.1 | SAMN05216188_105197 | SAMN05216188_105198 | Hypothetical protein. | MoxR-like ATPase. | 0.781 |
SEQ81270.1 | SEQ81330.1 | SAMN05216188_105197 | SAMN05216188_105199 | Hypothetical protein. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.937 |
SEQ81270.1 | SEQ81348.1 | SAMN05216188_105197 | SAMN05216188_105200 | Hypothetical protein. | Protein of unknown function. | 0.949 |
SEQ81270.1 | SEQ82582.1 | SAMN05216188_105197 | SAMN05216188_105238 | Hypothetical protein. | Proprotein convertase P-domain-containing protein. | 0.692 |
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