STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ88034.1Quinol monooxygenase YgiN. (109 aa)    
Predicted Functional Partners:
SEQ89579.1
Ferredoxin-NADP reductase.
 
  
  0.691
SEP78872.1
Hypothetical protein.
  
 
 0.663
SER16372.1
3-oxoadipate enol-lactonase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
  0.548
SES23212.1
Hypothetical protein.
  
    0.548
SEQ88012.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.541
SER16336.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
  0.522
SES12889.1
Alpha/beta hydrolase fold.
  
  
  0.464
SEQ33755.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
  
 
 0.431
SER14352.1
Rhamnulokinase.
  
 
 0.431
xylB
Xylulokinase.
  
 
 0.431
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.