STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER16526.1PucR C-terminal helix-turn-helix domain-containing protein. (378 aa)    
Predicted Functional Partners:
SES34438.1
Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.749
SES17341.1
Hypothetical protein.
  
     0.730
SEQ93355.1
Hypothetical protein.
  
     0.726
SER86830.1
Hypothetical protein.
  
     0.719
SES32365.1
Predicted SnoaL-like aldol condensation-catalyzing enzyme.
  
     0.713
SEQ89877.1
Uncharacterized conserved protein, DUF2236 family.
  
     0.702
SER90498.1
Heat-labile enterotoxin alpha chain.
  
     0.702
SES32272.1
Hypothetical protein.
  
     0.701
SEQ82902.1
Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.692
SEQ80052.1
Antimicrobial peptide system protein, SdpB family.
  
     0.689
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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