STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER16999.1Muconolactone delta-isomerase. (95 aa)    
Predicted Functional Partners:
menC-2
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
 
 0.957
SER16372.1
3-oxoadipate enol-lactonase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.933
SER16336.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.867
SES23652.1
4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase.
   
 
  0.860
SER63814.1
3-oxoadipate enol-lactonase.
  
 
  0.825
SEQ89247.1
Hydroxyquinol 1,2-dioxygenase.
 
  
 0.819
SEP82010.1
Hypothetical protein.
   
 
  0.776
SES17068.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
  0.776
SEQ29382.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.774
SER50030.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.774
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.