STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER25480.1Hypothetical protein. (551 aa)    
Predicted Functional Partners:
SES24097.1
Ketosteroid isomerase-related protein.
     
 0.810
SES23570.1
3-ketosteroid 9alpha-monooxygenase subunit A.
     
 0.782
SES23592.1
3-oxo-5alpha-steroid 4-dehydrogenase.
    
  0.772
SEP84907.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.759
SES23549.1
3-ketosteroid 9alpha-monooxygenase subunit B.
     
 0.759
SEP92666.1
Succinate dehydrogenase subunit A.
    
  0.752
SEQ69030.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
    
  0.752
SES24220.1
3-oxosteroid 1-dehydrogenase.
    
  0.752
SES23581.1
3-oxosteroid 1-dehydrogenase.
    
  0.752
SEQ81568.1
Phthalate 4,5-dioxygenase, reductase subunit.
     
 0.751
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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