Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP80497.1 | SER30761.1 | SAMN05216188_101542 | SAMN05216188_11012 | AAA domain-containing protein. | DNA repair exonuclease SbcCD nuclease subunit. | 0.951 |
SEP80497.1 | SER70142.1 | SAMN05216188_101542 | SAMN05216188_11471 | AAA domain-containing protein. | 5'-3' exonuclease. | 0.788 |
SEP80497.1 | SER78798.1 | SAMN05216188_101542 | SAMN05216188_115192 | AAA domain-containing protein. | ATP-dependent DNA helicase, Rep family. | 0.958 |
SEP80497.1 | SER97274.1 | SAMN05216188_101542 | SAMN05216188_118160 | AAA domain-containing protein. | ATP-dependent DNA helicase RecQ. | 0.759 |
SEP80497.1 | SES12047.1 | SAMN05216188_101542 | SAMN05216188_12299 | AAA domain-containing protein. | ATP-dependent DNA helicase DinG. | 0.533 |
SEP80497.1 | polA | SAMN05216188_101542 | SAMN05216188_103126 | AAA domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.946 |
SEP80882.1 | SER30761.1 | SAMN05216188_101553 | SAMN05216188_11012 | ATPase family associated with various cellular activities (AAA). | DNA repair exonuclease SbcCD nuclease subunit. | 0.951 |
SEP80882.1 | SER70142.1 | SAMN05216188_101553 | SAMN05216188_11471 | ATPase family associated with various cellular activities (AAA). | 5'-3' exonuclease. | 0.788 |
SEP80882.1 | SER78798.1 | SAMN05216188_101553 | SAMN05216188_115192 | ATPase family associated with various cellular activities (AAA). | ATP-dependent DNA helicase, Rep family. | 0.958 |
SEP80882.1 | SER97274.1 | SAMN05216188_101553 | SAMN05216188_118160 | ATPase family associated with various cellular activities (AAA). | ATP-dependent DNA helicase RecQ. | 0.759 |
SEP80882.1 | SES12047.1 | SAMN05216188_101553 | SAMN05216188_12299 | ATPase family associated with various cellular activities (AAA). | ATP-dependent DNA helicase DinG. | 0.533 |
SEP80882.1 | polA | SAMN05216188_101553 | SAMN05216188_103126 | ATPase family associated with various cellular activities (AAA). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.946 |
SEQ15864.1 | SER30761.1 | SAMN05216188_102248 | SAMN05216188_11012 | Exonuclease SbcC. | DNA repair exonuclease SbcCD nuclease subunit. | 0.951 |
SEQ15864.1 | SER70142.1 | SAMN05216188_102248 | SAMN05216188_11471 | Exonuclease SbcC. | 5'-3' exonuclease. | 0.788 |
SEQ15864.1 | SER78798.1 | SAMN05216188_102248 | SAMN05216188_115192 | Exonuclease SbcC. | ATP-dependent DNA helicase, Rep family. | 0.958 |
SEQ15864.1 | SER97274.1 | SAMN05216188_102248 | SAMN05216188_118160 | Exonuclease SbcC. | ATP-dependent DNA helicase RecQ. | 0.759 |
SEQ15864.1 | SES12047.1 | SAMN05216188_102248 | SAMN05216188_12299 | Exonuclease SbcC. | ATP-dependent DNA helicase DinG. | 0.533 |
SEQ15864.1 | polA | SAMN05216188_102248 | SAMN05216188_103126 | Exonuclease SbcC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.946 |
SER30738.1 | SER30761.1 | SAMN05216188_11011 | SAMN05216188_11012 | Uncharacterized protein YhaN. | DNA repair exonuclease SbcCD nuclease subunit. | 0.963 |
SER30738.1 | SER30816.1 | SAMN05216188_11011 | SAMN05216188_11014 | Uncharacterized protein YhaN. | RecF/RecN/SMC N terminal domain-containing protein. | 0.890 |
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