STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER30761.1DNA repair exonuclease SbcCD nuclease subunit. (276 aa)    
Predicted Functional Partners:
SER30816.1
RecF/RecN/SMC N terminal domain-containing protein.
 
 0.990
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.986
SER78798.1
ATP-dependent DNA helicase, Rep family.
  
 0.984
SER30738.1
Uncharacterized protein YhaN.
 
 
 0.963
SEP80497.1
AAA domain-containing protein.
  
 0.951
SEP80882.1
ATPase family associated with various cellular activities (AAA).
  
 0.951
SEQ15864.1
Exonuclease SbcC.
  
 0.951
SER70142.1
5'-3' exonuclease.
   
 0.917
SER97274.1
ATP-dependent DNA helicase RecQ.
  
 0.856
SES12047.1
ATP-dependent DNA helicase DinG.
   
 0.843
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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