STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER36112.1FcoT-like thioesterase domain-containing protein. (171 aa)    
Predicted Functional Partners:
SER36089.1
Taurine dioxygenase.
  
  
 0.966
SES14566.1
Taurine dioxygenase.
  
  
 0.857
SES21118.1
Gamma-butyrobetaine dioxygenase.
  
  
 0.582
SES27018.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
  
  
 0.582
SES37335.1
Gamma-butyrobetaine dioxygenase.
  
  
 0.582
SER36130.1
Acyl transferase domain-containing protein.
       0.567
SER36191.1
Long-chain acyl-CoA synthetase.
  
    0.540
SER36151.1
Candicidin polyketide synthase FscE; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.536
SER36211.1
Cytochrome P450.
       0.536
SER36237.1
Ferredoxin.
       0.536
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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