Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP89550.1 | SER31929.1 | SAMN05216188_101834 | SAMN05216188_11069 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | Ribosomal protein S18 acetylase RimI. | 0.482 |
SEP89550.1 | tsaD | SAMN05216188_101834 | SAMN05216188_101836 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
SER31929.1 | SEP89550.1 | SAMN05216188_11069 | SAMN05216188_101834 | Ribosomal protein S18 acetylase RimI. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.482 |
SER31929.1 | SER31952.1 | SAMN05216188_11069 | SAMN05216188_11070 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.559 |
SER31929.1 | SER75017.1 | SAMN05216188_11069 | SAMN05216188_1156 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.462 |
SER31929.1 | SES04861.1 | SAMN05216188_11069 | SAMN05216188_120104 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.465 |
SER31929.1 | SES08499.1 | SAMN05216188_11069 | SAMN05216188_121101 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.428 |
SER31929.1 | SES25705.1 | SAMN05216188_11069 | SAMN05216188_12854 | Ribosomal protein S18 acetylase RimI. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.593 |
SER31929.1 | tsaD | SAMN05216188_11069 | SAMN05216188_101836 | Ribosomal protein S18 acetylase RimI. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.410 |
SER31929.1 | ureA | SAMN05216188_11069 | SAMN05216188_102481 | Ribosomal protein S18 acetylase RimI. | Urease subunit gamma/beta; Belongs to the urease gamma subunit family. | 0.687 |
SER31952.1 | SER31929.1 | SAMN05216188_11070 | SAMN05216188_11069 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.559 |
SER75017.1 | SER31929.1 | SAMN05216188_1156 | SAMN05216188_11069 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.462 |
SES04861.1 | SER31929.1 | SAMN05216188_120104 | SAMN05216188_11069 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.465 |
SES04861.1 | SES25705.1 | SAMN05216188_120104 | SAMN05216188_12854 | Hypothetical protein. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.496 |
SES08499.1 | SER31929.1 | SAMN05216188_121101 | SAMN05216188_11069 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.428 |
SES25705.1 | SER31929.1 | SAMN05216188_12854 | SAMN05216188_11069 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Ribosomal protein S18 acetylase RimI. | 0.593 |
SES25705.1 | SES04861.1 | SAMN05216188_12854 | SAMN05216188_120104 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Hypothetical protein. | 0.496 |
tsaD | SEP89550.1 | SAMN05216188_101836 | SAMN05216188_101834 | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.999 |
tsaD | SER31929.1 | SAMN05216188_101836 | SAMN05216188_11069 | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Ribosomal protein S18 acetylase RimI. | 0.410 |
ureA | SER31929.1 | SAMN05216188_102481 | SAMN05216188_11069 | Urease subunit gamma/beta; Belongs to the urease gamma subunit family. | Ribosomal protein S18 acetylase RimI. | 0.687 |