STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER32204.1Sugar diacid utilization regulator. (515 aa)    
Predicted Functional Partners:
SER60109.1
Signal transduction histidine kinase.
   
 0.908
SEQ92032.1
PAS/PAC sensor hybrid histidine kinase.
   
 0.885
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.874
SES00156.1
Hypothetical protein.
  
 
 0.873
SER32159.1
3-hydroxybutyrate dehydrogenase.
 
     0.859
SER32184.1
Metabolite-proton symporter.
 
     0.831
SES04790.1
Response regulator receiver domain-containing protein.
    
 0.807
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.739
SES07526.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.710
SER18002.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.681
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.