STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER41397.1Transcriptional regulator, GntR family. (214 aa)    
Predicted Functional Partners:
SER41372.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
     0.819
SER41346.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.786
SES11784.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.777
SEQ91351.1
DNA-binding transcriptional regulator, GntR family.
  
     0.757
SER01286.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.746
SES25794.1
Transcriptional regulator, GntR family.
  
  
 0.662
SES09231.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.626
SES31618.1
Transcriptional regulator, GntR family.
  
  
 0.576
SER43673.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
  
 0.510
SER41424.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.455
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.