STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER62929.1HAMP domain-containing protein. (506 aa)    
Predicted Functional Partners:
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 0.997
SER60109.1
Signal transduction histidine kinase.
 
0.996
SER62958.1
Response regulator receiver domain-containing protein.
 0.995
SEQ92032.1
PAS/PAC sensor hybrid histidine kinase.
0.993
SEQ91105.1
Anti-anti-sigma factor.
 
 
 0.992
SES04809.1
DNA-binding transcriptional regulator, LacI/PurR family.
 0.992
SES00156.1
Hypothetical protein.
   
 0.978
SER62908.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.969
SES04790.1
Response regulator receiver domain-containing protein.
 
 
 0.969
SEQ87382.1
GAF domain-containing protein.
 
 0.961
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.