STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER63080.1Glyoxylase, beta-lactamase superfamily II. (329 aa)    
Predicted Functional Partners:
SER63013.1
Hypothetical protein.
       0.778
SER63045.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.778
SEQ11720.1
Adenylyltransferase and sulfurtransferase.
  
 0.775
SER63104.1
Hypothetical protein.
       0.664
SEP87153.1
Mce-associated membrane protein.
  
 
  0.604
SER62980.1
ClpX C4-type zinc finger.
       0.584
SEP87183.1
Mce-associated membrane protein.
  
 
  0.579
SEQ33974.1
Hypothetical protein.
  
     0.557
SES33281.1
Polyketide synthase PksN/rhizoxin biosynthesis, polyketide synthase RhiD.
   
 0.528
SES09041.1
Catechol 2,3-dioxygenase.
  
 
  0.524
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.