STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER70237.1Proline racemase; Belongs to the proline racemase family. (330 aa)    
Predicted Functional Partners:
SER70362.1
Glycine/D-amino acid oxidase.
 
  
 0.970
SER70290.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
  
  0.968
SER70257.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
    0.948
SER70328.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
  
  0.937
SER61018.1
Ornithine cyclodeaminase.
 
  
 0.917
SES35049.1
Ornithine cyclodeaminase.
 
  
 0.906
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.903
SER71766.1
Ornithine cyclodeaminase.
 
  
 0.900
SEP82877.1
L-proline dehydrogenase.
    
 0.809
SES18439.1
L-proline dehydrogenase.
    
 0.809
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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