STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER75098.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
SER75065.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
    0.905
SER75120.1
Transcriptional regulator, TetR family.
 
     0.695
SER18210.1
Phosphotransferase enzyme family protein.
  
     0.485
SEQ50390.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.473
SES24220.1
3-oxosteroid 1-dehydrogenase.
    
  0.448
SES23581.1
3-oxosteroid 1-dehydrogenase.
    
  0.448
SES16363.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
    0.420
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.