STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER86223.1Glycosyltransferase, GT2 family. (669 aa)    
Predicted Functional Partners:
SEQ80522.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.981
SEP63956.1
UDP-galactopyranose mutase.
 
 
 0.900
SER86467.1
O-antigen ligase.
 
 
 0.817
SEQ77685.1
Acyl transferase domain-containing protein.
  
 
 0.815
SER96829.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
 0.797
SER86250.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.788
SEP96278.1
Mannose-1-phosphate guanylyltransferase.
  
 0.785
SER00370.1
Hypothetical protein.
   
 0.761
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.761
SEQ64441.1
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.758
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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