STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER86830.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
SER86811.1
Hypothetical protein.
       0.786
SES17341.1
Hypothetical protein.
  
     0.773
SEP65292.1
NAD dependent epimerase/dehydratase family protein.
  
     0.769
SEQ80052.1
Antimicrobial peptide system protein, SdpB family.
  
     0.764
SER90498.1
Heat-labile enterotoxin alpha chain.
  
     0.761
SEQ99427.1
Hypothetical protein.
  
     0.757
SES34600.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
  
     0.753
SES34513.1
Colanic acid biosynthesis protein WcaH.
  
     0.750
SEQ79733.1
Predicted enzyme involved in methoxymalonyl-ACP biosynthesis.
  
     0.746
SER31675.1
NACHT domain-containing protein.
  
     0.739
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.