STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER82943.1ABC-type multidrug transport system, ATPase component. (243 aa)    
Predicted Functional Partners:
SER82918.1
Hypothetical protein.
 
    0.905
SEP93273.1
Putative ABC transport system ATP-binding protein.
  
  
  0.746
SEQ14490.1
ATP-binding cassette, subfamily C, CydC.
  
  
  0.721
SEQ64127.1
ATP-binding cassette, subfamily C.
 
  
  0.711
SEQ09739.1
Putative ABC transport system ATP-binding protein.
  
  
  0.691
SER14887.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  
  0.677
SEP81747.1
Putative ABC transport system ATP-binding protein.
  
  
  0.672
SES35562.1
Putative ABC transport system ATP-binding protein.
  
  
  0.671
SEQ15463.1
ABC-2 type transport system permease protein.
   
  0.646
SEQ45815.1
ABC-2 type transport system permease protein.
   
  0.646
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.