STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER91740.1DNA-binding transcriptional activator of the SARP family. (962 aa)    
Predicted Functional Partners:
SER60109.1
Signal transduction histidine kinase.
   
 0.864
SES00156.1
Hypothetical protein.
   
 0.849
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.807
SER91605.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
  
     0.770
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.767
SER91720.1
Helix-turn-helix domain-containing protein.
  
    0.763
SER91635.1
Hypothetical protein.
  
    0.748
SES17908.1
Hypothetical protein.
  
 
 0.743
SEQ43405.1
Molecular chaperone HtpG.
  
  0.742
SER91768.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
 
     0.721
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.