STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER89106.1Ricin-type beta-trefoil lectin domain-containing protein. (528 aa)    
Predicted Functional Partners:
SES20136.1
Endo-1,4-beta-xylanase.
 
 
   0.715
SEQ88963.1
Necrosis inducing protein (NPP1).
  
     0.603
SEQ89532.1
Lysophospholipase L1.
  
  
  0.589
SEQ95579.1
Poly(3-hydroxybutyrate) depolymerase.
  
 
   0.577
SES18956.1
Ricin-type beta-trefoil lectin domain-like.
 
 
  
0.562
SER33507.1
Hypothetical protein.
  
  
  0.559
SEQ99922.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
     0.558
SES20257.1
Glycosyl hydrolases family 43.
 
  
  0.537
SER24986.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.527
SER59635.1
Glycosyl hydrolases family 18.
 
  
  0.516
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.