STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER90729.1Minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (418 aa)    
Predicted Functional Partners:
SES25836.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
 
 0.996
SES33281.1
Polyketide synthase PksN/rhizoxin biosynthesis, polyketide synthase RhiD.
0.987
SER36130.1
Acyl transferase domain-containing protein.
 
0.982
SER90182.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 0.980
SES32313.1
Hypothetical protein.
  
 0.979
SES33269.1
trans-AT polyketide synthase, acyltransferase and oxidoreductase domain-containing protein.
 0.979
SES34423.1
Epothilone polyketide synthase A.
  
 0.978
SEQ64340.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.976
SES06760.1
Mycocerosic acid synthase.
 
0.975
SES32606.1
Type I polyketide synthase PikAI.
 
0.973
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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