STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER90997.1TIGR02680 family protein. (1356 aa)    
Predicted Functional Partners:
SER91051.1
TIGR02677 family protein.
 
     0.954
SER91024.1
TIGR02678 family protein.
 
     0.950
SER91076.1
TIGR02679 family protein.
 
     0.936
SER60109.1
Signal transduction histidine kinase.
  
 0.928
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
  0.847
SER40148.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.813
SES19167.1
TIGR02677 family protein.
 
     0.805
SES07526.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
  
  0.804
SES19175.1
TIGR02678 family protein.
 
     0.792
SES00156.1
Hypothetical protein.
  
  0.785
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.