STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER95411.1Phage portal protein, SPP1 Gp6-like. (536 aa)    
Predicted Functional Partners:
SER95395.1
Phage minor capsid protein 2.
 
    0.981
SER95446.1
Phage terminase, large subunit, PBSX family.
 
    0.851
SER95375.1
Hypothetical protein.
 
     0.751
SES07622.1
Hypothetical protein.
  
     0.751
SES05397.1
Patatin-related protein.
  
     0.745
SES26872.1
Condensation domain-containing protein.
  
     0.724
SER95516.1
Transcription factor WhiB.
  
     0.638
SES15170.1
Sigma 54 modulation protein / S30EA ribosomal protein.
  
     0.630
SER76737.1
Hypothetical protein.
  
     0.618
SER96023.1
Putative phage-type endonuclease.
  
     0.612
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.