STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER99517.1AAA ATPase domain-containing protein. (352 aa)    
Predicted Functional Partners:
SES00156.1
Hypothetical protein.
   
 0.937
SER60109.1
Signal transduction histidine kinase.
  
 0.888
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.877
SEQ92032.1
PAS/PAC sensor hybrid histidine kinase.
   
 0.814
SES04809.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.764
SER81830.1
Putative transposase of IS4/5 family.
 
    0.759
SES24260.1
Putative transposase of IS4/5 family.
 
    0.759
SES37561.1
Putative transposase of IS4/5 family.
 
    0.759
SES15480.1
Putative transposase of IS4/5 family.
  
    0.724
SES34881.1
Putative transposase of IS4/5 family.
  
    0.724
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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