Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ08339.1 | SEQ11564.1 | SAMN05216188_1023 | SAMN05216188_102115 | Glutamine synthetase. | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.903 |
SEQ08339.1 | SEQ27031.1 | SAMN05216188_1023 | SAMN05216188_102607 | Glutamine synthetase. | Glutamine--fructose-6-phosphate transaminase. | 0.900 |
SEQ08339.1 | SEQ50390.1 | SAMN05216188_1023 | SAMN05216188_103253 | Glutamine synthetase. | Glutamate synthase (NADPH/NADH) large chain. | 0.984 |
SEQ08339.1 | SEQ53268.1 | SAMN05216188_1023 | SAMN05216188_103357 | Glutamine synthetase. | L-glutamine synthetase. | 0.911 |
SEQ08339.1 | SES03240.1 | SAMN05216188_1023 | SAMN05216188_1204 | Glutamine synthetase. | L-glutamine synthetase. | 0.904 |
SEQ08339.1 | SES03256.1 | SAMN05216188_1023 | SAMN05216188_1205 | Glutamine synthetase. | Putative glutamine amidotransferase. | 0.662 |
SEQ08339.1 | SES03270.1 | SAMN05216188_1023 | SAMN05216188_1206 | Glutamine synthetase. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.652 |
SEQ08339.1 | gcvP | SAMN05216188_1023 | SAMN05216188_111110 | Glutamine synthetase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.917 |
SEQ11564.1 | SEQ08339.1 | SAMN05216188_102115 | SAMN05216188_1023 | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Glutamine synthetase. | 0.903 |
SEQ11564.1 | SEQ50390.1 | SAMN05216188_102115 | SAMN05216188_103253 | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Glutamate synthase (NADPH/NADH) large chain. | 0.943 |
SEQ11564.1 | SEQ53268.1 | SAMN05216188_102115 | SAMN05216188_103357 | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-glutamine synthetase. | 0.915 |
SEQ11564.1 | SES03240.1 | SAMN05216188_102115 | SAMN05216188_1204 | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-glutamine synthetase. | 0.903 |
SEQ11564.1 | gcvP | SAMN05216188_102115 | SAMN05216188_111110 | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.751 |
SEQ27031.1 | SEQ08339.1 | SAMN05216188_102607 | SAMN05216188_1023 | Glutamine--fructose-6-phosphate transaminase. | Glutamine synthetase. | 0.900 |
SEQ27031.1 | SEQ50390.1 | SAMN05216188_102607 | SAMN05216188_103253 | Glutamine--fructose-6-phosphate transaminase. | Glutamate synthase (NADPH/NADH) large chain. | 0.967 |
SEQ27031.1 | SEQ53268.1 | SAMN05216188_102607 | SAMN05216188_103357 | Glutamine--fructose-6-phosphate transaminase. | L-glutamine synthetase. | 0.896 |
SEQ27031.1 | SES03240.1 | SAMN05216188_102607 | SAMN05216188_1204 | Glutamine--fructose-6-phosphate transaminase. | L-glutamine synthetase. | 0.908 |
SEQ50390.1 | SEQ08339.1 | SAMN05216188_103253 | SAMN05216188_1023 | Glutamate synthase (NADPH/NADH) large chain. | Glutamine synthetase. | 0.984 |
SEQ50390.1 | SEQ11564.1 | SAMN05216188_103253 | SAMN05216188_102115 | Glutamate synthase (NADPH/NADH) large chain. | Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.943 |
SEQ50390.1 | SEQ27031.1 | SAMN05216188_103253 | SAMN05216188_102607 | Glutamate synthase (NADPH/NADH) large chain. | Glutamine--fructose-6-phosphate transaminase. | 0.967 |
page 1 of 4