node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES17917.1 | rplC | SAMN05216188_1253 | SAMN05216188_101770 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.801 |
SES17917.1 | rplM | SAMN05216188_1253 | SAMN05216188_101817 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.804 |
SES17917.1 | rplR | SAMN05216188_1253 | SAMN05216188_101786 | ATP-binding cassette protein, ChvD family. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.797 |
SES17917.1 | rplS | SAMN05216188_1253 | SAMN05216188_112241 | ATP-binding cassette protein, ChvD family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.814 |
SES17917.1 | rplT | SAMN05216188_1253 | SAMN05216188_10329 | ATP-binding cassette protein, ChvD family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.824 |
SES17917.1 | rplU | SAMN05216188_1253 | SAMN05216188_118150 | ATP-binding cassette protein, ChvD family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.807 |
SES17917.1 | rpsC | SAMN05216188_1253 | SAMN05216188_101776 | ATP-binding cassette protein, ChvD family. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.804 |
SES17917.1 | rpsE | SAMN05216188_1253 | SAMN05216188_101787 | ATP-binding cassette protein, ChvD family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.822 |
SES17917.1 | rpsO | SAMN05216188_1253 | SAMN05216188_103411 | ATP-binding cassette protein, ChvD family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.805 |
SES17917.1 | rpsT | SAMN05216188_1253 | SAMN05216188_118176 | ATP-binding cassette protein, ChvD family. | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.830 |
rplC | SES17917.1 | SAMN05216188_101770 | SAMN05216188_1253 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ATP-binding cassette protein, ChvD family. | 0.801 |
rplC | rplM | SAMN05216188_101770 | SAMN05216188_101817 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplR | SAMN05216188_101770 | SAMN05216188_101786 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplC | rplS | SAMN05216188_101770 | SAMN05216188_112241 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
rplC | rplT | SAMN05216188_101770 | SAMN05216188_10329 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplC | rplU | SAMN05216188_101770 | SAMN05216188_118150 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
rplC | rpsC | SAMN05216188_101770 | SAMN05216188_101776 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplC | rpsE | SAMN05216188_101770 | SAMN05216188_101787 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplC | rpsO | SAMN05216188_101770 | SAMN05216188_103411 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rplC | rpsT | SAMN05216188_101770 | SAMN05216188_118176 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.996 |