STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES19087.1DUF4097 and DUF4098 domain-containing protein YvlB. (280 aa)    
Predicted Functional Partners:
SES19097.1
Ribbon-helix-helix protein, copG family.
 
     0.907
SES19060.1
ABC-2 type transport system permease protein.
 
     0.857
SES19074.1
ABC-2 type transport system ATP-binding protein.
 
    0.806
SER89448.1
Hypothetical protein.
 
     0.789
SES19052.1
Cytochrome P450.
       0.756
SEQ54454.1
HicB family protein.
 
     0.719
SER89423.1
DUF4097 and DUF4098 domain-containing protein YvlB.
 
 
 
0.522
SEP70443.1
Protein of unknown function.
  
  
 0.512
SEP93496.1
Cell wall-active antibiotics response 4TMS YvqF.
  
  
 0.512
SES16695.1
Pentapeptide repeat-containing protein.
  
 
   0.491
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.