node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES25900.1 | rplA | SAMN05216188_12868 | SAMN05216188_101738 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.820 |
SES25900.1 | rplC | SAMN05216188_12868 | SAMN05216188_101770 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.801 |
SES25900.1 | rplM | SAMN05216188_12868 | SAMN05216188_101817 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.804 |
SES25900.1 | rplR | SAMN05216188_12868 | SAMN05216188_101786 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.797 |
SES25900.1 | rplT | SAMN05216188_12868 | SAMN05216188_10329 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.797 |
SES25900.1 | rplU | SAMN05216188_12868 | SAMN05216188_118150 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.807 |
SES25900.1 | rplW | SAMN05216188_12868 | SAMN05216188_101772 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.795 |
SES25900.1 | rpmC | SAMN05216188_12868 | SAMN05216188_101778 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.816 |
SES25900.1 | rpsC | SAMN05216188_12868 | SAMN05216188_101776 | Macrolide transport system ATP-binding/permease protein. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.804 |
SES25900.1 | rpsO | SAMN05216188_12868 | SAMN05216188_103411 | Macrolide transport system ATP-binding/permease protein. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.805 |
rplA | SES25900.1 | SAMN05216188_101738 | SAMN05216188_12868 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Macrolide transport system ATP-binding/permease protein. | 0.820 |
rplA | rplC | SAMN05216188_101738 | SAMN05216188_101770 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rplA | rplM | SAMN05216188_101738 | SAMN05216188_101817 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplA | rplR | SAMN05216188_101738 | SAMN05216188_101786 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplA | rplT | SAMN05216188_101738 | SAMN05216188_10329 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplA | rplU | SAMN05216188_101738 | SAMN05216188_118150 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
rplA | rplW | SAMN05216188_101738 | SAMN05216188_101772 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplA | rpmC | SAMN05216188_101738 | SAMN05216188_101778 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplA | rpsC | SAMN05216188_101738 | SAMN05216188_101776 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplA | rpsO | SAMN05216188_101738 | SAMN05216188_103411 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |