Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP91644.1 | SES35709.1 | SAMN05216188_101901 | SAMN05216188_13828 | Protein of unknown function. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.548 |
SER00857.1 | SES35709.1 | SAMN05216188_10758 | SAMN05216188_13828 | Protein of unknown function. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.548 |
SER53834.1 | SES35709.1 | SAMN05216188_112167 | SAMN05216188_13828 | Hypothetical protein. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.548 |
SER91821.1 | SES35709.1 | SAMN05216188_117134 | SAMN05216188_13828 | Pyridoxamine 5'-phosphate oxidase family protein. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.548 |
SES24206.1 | SES35709.1 | SAMN05216188_127115 | SAMN05216188_13828 | PPOX class probable F420-dependent enzyme. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.606 |
SES35697.1 | SES35709.1 | SAMN05216188_13827 | SAMN05216188_13828 | Hypothetical protein. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.785 |
SES35697.1 | SES35722.1 | SAMN05216188_13827 | SAMN05216188_13829 | Hypothetical protein. | Protein of unknown function. | 0.526 |
SES35709.1 | SEP91644.1 | SAMN05216188_13828 | SAMN05216188_101901 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Protein of unknown function. | 0.548 |
SES35709.1 | SER00857.1 | SAMN05216188_13828 | SAMN05216188_10758 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Protein of unknown function. | 0.548 |
SES35709.1 | SER53834.1 | SAMN05216188_13828 | SAMN05216188_112167 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Hypothetical protein. | 0.548 |
SES35709.1 | SER91821.1 | SAMN05216188_13828 | SAMN05216188_117134 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Pyridoxamine 5'-phosphate oxidase family protein. | 0.548 |
SES35709.1 | SES24206.1 | SAMN05216188_13828 | SAMN05216188_127115 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | PPOX class probable F420-dependent enzyme. | 0.606 |
SES35709.1 | SES35697.1 | SAMN05216188_13828 | SAMN05216188_13827 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Hypothetical protein. | 0.785 |
SES35709.1 | SES35722.1 | SAMN05216188_13828 | SAMN05216188_13829 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Protein of unknown function. | 0.526 |
SES35709.1 | prcA | SAMN05216188_13828 | SAMN05216188_11449 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.494 |
SES35709.1 | whiB | SAMN05216188_13828 | SAMN05216188_1011064 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.493 |
SES35709.1 | whiB-8 | SAMN05216188_13828 | SAMN05216188_11885 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.535 |
SES35722.1 | SES35697.1 | SAMN05216188_13829 | SAMN05216188_13827 | Protein of unknown function. | Hypothetical protein. | 0.526 |
SES35722.1 | SES35709.1 | SAMN05216188_13829 | SAMN05216188_13828 | Protein of unknown function. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.526 |
prcA | SES35709.1 | SAMN05216188_11449 | SAMN05216188_13828 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.494 |
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