Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP85318.1 | SEQ65352.1 | SAMN05216188_101691 | SAMN05216188_104184 | NADH dehydrogenase subunit E. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.942 |
SEP85318.1 | SEQ71238.1 | SAMN05216188_101691 | SAMN05216188_104406 | NADH dehydrogenase subunit E. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.866 |
SEP85318.1 | SEQ79908.1 | SAMN05216188_101691 | SAMN05216188_105145 | NADH dehydrogenase subunit E. | Amino acid adenylation domain-containing protein. | 0.942 |
SEP85318.1 | SER01722.1 | SAMN05216188_101691 | SAMN05216188_10789 | NADH dehydrogenase subunit E. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.942 |
SEP85318.1 | SER15689.1 | SAMN05216188_101691 | SAMN05216188_108131 | NADH dehydrogenase subunit E. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
SEP85318.1 | SER60497.1 | SAMN05216188_101691 | SAMN05216188_11368 | NADH dehydrogenase subunit E. | Glycine/D-amino acid oxidase. | 0.987 |
SEP85318.1 | SES00711.1 | SAMN05216188_101691 | SAMN05216188_11974 | NADH dehydrogenase subunit E. | Alpha/beta hydrolase fold. | 0.731 |
SEP85318.1 | SES33281.1 | SAMN05216188_101691 | SAMN05216188_13420 | NADH dehydrogenase subunit E. | Polyketide synthase PksN/rhizoxin biosynthesis, polyketide synthase RhiD. | 0.731 |
SEP85318.1 | SES35089.1 | SAMN05216188_101691 | SAMN05216188_13721 | NADH dehydrogenase subunit E. | Non-ribosomal peptide synthetase component F. | 0.942 |
SEP85318.1 | SES37763.1 | SAMN05216188_101691 | SAMN05216188_1459 | NADH dehydrogenase subunit E. | Acetyl esterase/lipase. | 0.731 |
SEQ65352.1 | SEP85318.1 | SAMN05216188_104184 | SAMN05216188_101691 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | NADH dehydrogenase subunit E. | 0.942 |
SEQ65352.1 | SEQ79908.1 | SAMN05216188_104184 | SAMN05216188_105145 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Amino acid adenylation domain-containing protein. | 0.999 |
SEQ65352.1 | SER01722.1 | SAMN05216188_104184 | SAMN05216188_10789 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SEQ65352.1 | SER15689.1 | SAMN05216188_104184 | SAMN05216188_108131 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
SEQ65352.1 | SER60497.1 | SAMN05216188_104184 | SAMN05216188_11368 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Glycine/D-amino acid oxidase. | 0.984 |
SEQ65352.1 | SES00711.1 | SAMN05216188_104184 | SAMN05216188_11974 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Alpha/beta hydrolase fold. | 0.940 |
SEQ65352.1 | SES33281.1 | SAMN05216188_104184 | SAMN05216188_13420 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Polyketide synthase PksN/rhizoxin biosynthesis, polyketide synthase RhiD. | 0.999 |
SEQ65352.1 | SES35089.1 | SAMN05216188_104184 | SAMN05216188_13721 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Non-ribosomal peptide synthetase component F. | 0.999 |
SEQ65352.1 | SES37763.1 | SAMN05216188_104184 | SAMN05216188_1459 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Acetyl esterase/lipase. | 0.940 |
SEQ71238.1 | SEP85318.1 | SAMN05216188_104406 | SAMN05216188_101691 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NADH dehydrogenase subunit E. | 0.866 |
page 1 of 5