STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldHGliding motility lipoprotein precursor GldH. (170 aa)    
Predicted Functional Partners:
fjo17
Protein of unknown function Fjo17.
 
     0.850
gldK
Gliding motility lipoprotein precursor GldK.
  
   
 0.841
mrcA
Penicillin-binding protein 1A.
       0.827
gldB
Gliding motility lipoprotein precursor GldB.
  
   
 0.817
gldD
Gliding motility lipoprotein precursor GldD.
  
   
 0.810
gldG
Gliding motility transmembrane protein GldG.
  
   
 0.788
gldJ
Gliding motility lipoprotein precursor GldJ.
  
   
 0.780
sprE
SprE lipoprotein precursor.
  
   
 0.745
gldI
Gliding motility lipoprotein precursor GldI.
  
   
 0.743
gldL
Gliding motility transmembrane protein GldL.
  
   
 0.703
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.