STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tasOxidoreductase Tas, aldo/keto reductase family. (346 aa)    
Predicted Functional Partners:
FP2172
Protein of unknown function.
    
 0.784
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
  0.574
glcD
(S)-2-hydroxy-acid oxidase.
     
 0.547
FP0142
Probable alcohol dehydrogenase.
  
 
 0.532
menE
o-succinylbenzoate--CoA ligase.
   
 0.531
FP1910
Putative oxidoreductase.
  
 
 0.529
FP0061
Flagellar motor/Chemotaxis (MotB)-related lipoprotein precursor.
       0.520
ppiB
Probable peptidyl-prolyl cis-trans isomerase precursor PpiB.
    
   0.497
ppiA
Probable peptidyl-prolyl cis-trans isomerase precursor PpiA.
    
   0.497
ppiC
Probable peptidyl-prolyl cis-trans isomerase PpiC.
    
   0.497
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
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