Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FP0094 | FP2316 | FP0094 | FP2316 | Protein of unknown function. | Hypothetical protein precursor. | 0.810 |
FP0094 | FP2317 | FP0094 | FP2317 | Protein of unknown function. | Protein of unknown function. | 0.661 |
FP0094 | gspE | FP0094 | FP2300 | Protein of unknown function. | Putative bacterial general secretion pathway protein E. | 0.760 |
FP0094 | sdhA | FP0094 | FP0093 | Protein of unknown function. | Succinate dehydrogenase, flavoprotein subunit. | 0.539 |
FP0094 | sdhB | FP0094 | FP0095 | Protein of unknown function. | Succinate dehydrogenase, iron-sulfur protein. | 0.600 |
FP0094 | sdhC | FP0094 | FP0092 | Protein of unknown function. | Succinate dehydrogenase, cytochrome b subunit. | 0.531 |
FP2316 | FP0094 | FP2316 | FP0094 | Hypothetical protein precursor. | Protein of unknown function. | 0.810 |
FP2316 | FP2317 | FP2316 | FP2317 | Hypothetical protein precursor. | Protein of unknown function. | 0.863 |
FP2316 | gspE | FP2316 | FP2300 | Hypothetical protein precursor. | Putative bacterial general secretion pathway protein E. | 0.409 |
FP2317 | FP0094 | FP2317 | FP0094 | Protein of unknown function. | Protein of unknown function. | 0.661 |
FP2317 | FP2316 | FP2317 | FP2316 | Protein of unknown function. | Hypothetical protein precursor. | 0.863 |
FP2317 | gspE | FP2317 | FP2300 | Protein of unknown function. | Putative bacterial general secretion pathway protein E. | 0.996 |
gspE | FP0094 | FP2300 | FP0094 | Putative bacterial general secretion pathway protein E. | Protein of unknown function. | 0.760 |
gspE | FP2316 | FP2300 | FP2316 | Putative bacterial general secretion pathway protein E. | Hypothetical protein precursor. | 0.409 |
gspE | FP2317 | FP2300 | FP2317 | Putative bacterial general secretion pathway protein E. | Protein of unknown function. | 0.996 |
sdhA | FP0094 | FP0093 | FP0094 | Succinate dehydrogenase, flavoprotein subunit. | Protein of unknown function. | 0.539 |
sdhA | sdhB | FP0093 | FP0095 | Succinate dehydrogenase, flavoprotein subunit. | Succinate dehydrogenase, iron-sulfur protein. | 0.999 |
sdhA | sdhC | FP0093 | FP0092 | Succinate dehydrogenase, flavoprotein subunit. | Succinate dehydrogenase, cytochrome b subunit. | 0.998 |
sdhB | FP0094 | FP0095 | FP0094 | Succinate dehydrogenase, iron-sulfur protein. | Protein of unknown function. | 0.600 |
sdhB | sdhA | FP0095 | FP0093 | Succinate dehydrogenase, iron-sulfur protein. | Succinate dehydrogenase, flavoprotein subunit. | 0.999 |
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