STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
darADialkylrecorsinol condensing enzyme DarA. (300 aa)    
Predicted Functional Partners:
darB
3-oxoacyl-[acyl-carrier-protein] synthase III protein DarB.
 
  
 0.963
FP2275
Protein of unknown function. Probably involved in flexirubin biosynthesis.
 
     0.946
FP2276
Protein of unknown function.
 
     0.946
darC2
Probable acyl carrier protein involved in flexirubin-type pigment biosynthesis DarC2.
 
     0.944
darC1
Probable acyl carrier protein involved in flexirubin-type pigment biosynthesis DarC1.
 
     0.933
FP2271
Probable ABC-type transport system, permease component.
 
     0.907
FP2268
Protein of unknown function.
 
    0.889
FP2256
Probable bifunctional protein : exporter and 1-acyl-sn-glycerol-3-phosphate acyltransferase precursor.
 
   
 0.887
FP2272
Probable ABC-type transport system, ATPase component.
 
     0.880
FP2264
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    0.861
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.