STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2361Hypothetical protein precursor. (333 aa)    
Predicted Functional Partners:
FP2362
Probable membrane-associated phospholipid phosphatase.
 
 
 0.889
cinA
CinA-like protein; Belongs to the CinA family.
  
  
 0.824
cdsA
Phosphatidate cytidylyltransferase.
  
 
  0.626
FP0962
Probable phosphoglycerol transferase.
 
     0.605
metX
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
 
 
  0.601
FP0735
Putative DNA binding protein.
  
    0.575
FP1568
Putative DNA binding protein.
  
    0.575
psd
Phosphatidylserine decarboxylase.
    
 0.570
FP0255
Homoserine dehydrogenase.
   
  0.543
ftsX
Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.532
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.