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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpic_1237PFAM: Domain of unknown function DUF1857; KEGG: rso:RSc1364 hypothetical protein. (156 aa)    
Predicted Functional Partners:
Rpic_2569
PFAM: HemY domain protein; KEGG: rso:RSc2355 putative protein porphyrin biosynthesis.
  
     0.700
Rpic_1271
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.696
Rpic_2160
KEGG: rso:RSc2005 hypothetical protein.
  
     0.696
Rpic_3235
KEGG: rso:RSc2957 putative signal peptide protein.
  
     0.671
Rpic_2132
PFAM: Sporulation domain protein; KEGG: rso:RSc1978 probable transmembrane protein.
  
     0.660
Rpic_0165
PFAM: Sporulation domain protein; KEGG: rso:RSc0310 putative signal peptide protein.
  
     0.644
Rpic_1424
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: rso:RSc1785 DNA polymerase III subunit delta'.
  
     0.627
Rpic_0172
PFAM: VanZ family protein; KEGG: rso:RSc0317 probable transmembrane protein.
  
     0.574
Rpic_0335
PFAM: Sterol-binding domain protein; KEGG: rso:RSc0460 hypothetical protein.
  
     0.565
Rpic_2156
KEGG: rso:RSc2001 probable signal peptide protein.
  
     0.563
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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