Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Rpic_1997PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc1556 probable oxidoreductase protein. (470 aa)    
Predicted Functional Partners:
Rpic_1996
KEGG: rso:RSc1557 probable transmembrane protein.
 
     0.861
Rpic_1995
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: rso:RSc1558 probable TRP repressor binding protein; Belongs to the WrbA family.
     
 0.793
Rpic_1994
PFAM: ribonuclease BN; KEGG: rso:RSc1559 putative ribonuclease BN transmembrane protein.
       0.688
Rpic_2640
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: vei:Veis_2092 electron transfer flavoprotein, alpha subunit.
 
 
 0.587
Rpic_0794
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rso:RSc0924 probable electron transfer flavoprotein (alpha-subunit).
 
 
 0.583
Rpic_2639
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_3731 electron transfer flavoprotein beta-subunit.
 
 
 0.556
Rpic_0793
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rso:RSc0923 probable electron transfer flavoprotein (beta-subunit).
 
 
 0.554
Rpic_0218
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.480
Rpic_3243
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rso:RSc2965 probable glutamate synthase (large subunit) oxidoreductase protein.
     
 0.445
Rpic_2904
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc2668 glycolate oxidase iron-sulfur subunit.
 
  
 0.406
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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