Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rpic_2016TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: rso:RSc1539 probable hydrolase protein. (157 aa)    
Predicted Functional Partners:
Rpic_2017
KEGG: rso:RSc1538 hypothetical protein.
       0.593
Rpic_1271
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.491
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
     0.465
Rpic_0781
KEGG: rso:RSc0911 probable transmembrane protein.
  
     0.455
cobD
Cobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
     0.438
Rpic_0924
PFAM: glutaredoxin 2; KEGG: rso:RSc1059 hypothetical protein.
 
     0.434
Rpic_2014
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: rso:RSc1543 probable transcription regulator protein.
       0.433
Rpic_2015
PFAM: protein of unknown function DUF81; KEGG: rso:RSc1541 probable transmembrane protein.
       0.422
Rpic_2018
PFAM: Ppx/GppA phosphatase; KEGG: rso:RSc1537 probable exopolyphosphatase protein.
 
 
   0.421
Rpic_0343
PFAM: NUDIX hydrolase; KEGG: rso:RSc0468 dATP pyrophosphohydrolase.
 
     0.414
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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