Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rpic_4331PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0831 monoamine oxidase (flavin containing). (498 aa)    
Predicted Functional Partners:
Rpic_1338
PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSc1456 putative betaine aldehyde dehydrogenase (BADH) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Rpic_2566
PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSc2350 probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Rpic_4437
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc1505 probable alcohol dehydrogenase-like oxidoreductase protein.
    
 0.903
Rpic_0535
TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rso:RSp0069 probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
  0.900
Rpic_4264
PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_3149 GCN5-related N-acetyltransferase.
     
  0.900
Rpic_0115
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc0262 putative 2-hydroxyacid dehydrogenase oxidoreductase protein.
    
 0.872
Rpic_2353
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pde:Pden_0341 DNA methylase N-4/N-6 domain protein.
    
 0.871
Rpic_0789
PFAM: histone deacetylase superfamily; KEGG: rso:RSc0919 hypothetical protein.
   
 0.844
Rpic_1941
PFAM: histone deacetylase superfamily; KEGG: rso:RSc1606 hypothetical protein.
   
 0.844
Rpic_0692
Gluconate 2-dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bmu:Bmul_1528 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
     
 0.810
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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