STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpic_4334TnpC; KEGG: bvi:Bcep1808_7205 TnpC. (111 aa)    
Predicted Functional Partners:
Rpic_4333
PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7171 transposase Tn3 family protein.
       0.780
Rpic_4331
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0831 monoamine oxidase (flavin containing).
       0.505
Rpic_4332
Hypothetical protein; KEGG: bch:Bcen2424_5824 cytochrome c, class I.
       0.505
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.