Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rpic_4635PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM. (104 aa)    
Predicted Functional Partners:
Rpic_4636
PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase.
 
  
  0.994
Rpic_4632
PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5679 methane/phenol/toluene hydroxylase:YHS.
 
  
  0.991
Rpic_4634
PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B5677 Rieske (2Fe-2S) region.
 
  
  0.981
Rpic_4637
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5674 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
 
  
  0.976
Rpic_4633
PFAM: Toluene-4-monooxygenase system B; KEGG: reu:Reut_B5678 toluene-4-monooxygenase system B.
    
  0.973
Rpic_4630
PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5681 methane/phenol/toluene hydroxylase.
 
  
  0.921
Rpic_4628
PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5683 methane/phenol/toluene hydroxylase:YHS.
 
  
  0.918
Rpic_4627
PFAM: Phenol hydroxylase conserved region; KEGG: reu:Reut_B5684 phenol hydroxylase conserved region.
  
  
  0.913
Rpic_4626
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5685 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
  
  
  0.892
Rpic_4625
PFAM: ferredoxin; KEGG: reu:Reut_B5686 ferredoxin.
  
     0.747
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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